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Migrating from FreshBooks to QuickBooks is a strategic move for businesses seeking advanced accounting tools, better scalability, and deeper financial insights. Unlike FreshBooks, QuickBooks offers robust reporting, inventory management, payroll integration, and support for larger teams.

Before starting the migration, it’s crucial to back up your FreshBooks data and prepare QuickBooks for the transition. Export essential data like invoices, expenses, and client records in CSV (Comma-Separated Values) or Excel formats.

QuickBooks supports multiple import methods, including manual uploads and third-party tools for automation. Formatting your data correctly and mapping fields accurately will help prevent errors during import.

Once the data is transferred, review its accuracy by cross-checking key financial reports such as profit & loss statements and balance sheets. Configure tax settings, verify open balances, and ensure all transactions are correctly linked.

Step 1: Back Up Your FreshBooks Data

Always start by creating a backup of your FreshBooks data. This ensures that no information is lost during the migration process. Export all necessary data, such as invoices, expenses, clients, and reports from FreshBooks into CSV or Excel files.

Below are the steps to do this.

  • Navigate to the Reports section in FreshBooks.
  • Export reports like Invoice Details, Expenses, and other relevant data by selecting the “Export for Excel” option.

Step 2: Prepare QuickBooks for Migration

Set up your QuickBooks account before importing any data. If you’re using QuickBooks Online, create an account and ensure it is ready to receive the data.

For QuickBooks Desktop, verify that your system meets the software requirements (e.g., sufficient disk space and compatible operating system).

Step 3: Organize Your Data for Import

Format your exported data to match QuickBooks’ import requirements. QuickBooks supports various file formats such as CSV, Excel (.xls or .xlsx), or IIF. Ensure the following.

  • Data fields in your files (e.g., client names, invoice numbers) align with QuickBooks templates.
  • You clean up any duplicate or unnecessary entries to avoid errors during import.

Step 4: Choose a Migration Method

Select the most suitable method for migrating your data. You have two main options here.

  1. Manual Import: Use QuickBooks’s built-in import tools to upload CSV or Excel files containing your data.
  2. Third-Party Tools: Use specialized tools like SaasAnt Transactions or MMC Convert for a more automated and efficient migration process.

Step 5: Import Clients and Vendors

Start by importing your client and vendor lists into QuickBooks. These are foundational records needed for invoices and expenses. Follow the below steps.

  • Go to the “Import Data” section in QuickBooks.
  • Select “Customers” or “Vendors,” upload the relevant CSV file, and map the fields correctly.

Step 6: Migrate Invoices and Expenses

Next, invoices and expenses are transferred into QuickBooks. This step ensures continuity in tracking accounts receivable and payable.

  • For invoices, select “Import Data” > “Invoices” in QuickBooks.
  • For expenses, use the “Expenses” import option.
  • Map fields like dates, amounts, and descriptions carefully to avoid discrepancies.

Step 7: Transfer Chart of Accounts

Set up your Chart of Accounts in QuickBooks to match your structure in FreshBooks, especially if you’ve exported this data with the help of the steps listed below:

  • Go to the Chart of Accounts section in QuickBooks.
  • Import the file or manually create accounts if needed.
  • Ensure account types (e.g., income, expense) are correctly categorized.

Step 8: Review Data Accuracy

Verify that all imported data is accurate and complete. Cross-check key reports like profit & loss statements, balance sheets, and transaction histories between FreshBooks and QuickBooks/

  • Run trial balances in both systems to ensure consistency.
  • Address any discrepancies by reimporting or manually adjusting entries.

Step 9: Configure Tax Settings

Adjust tax settings in QuickBooks to match those in FreshBooks. Custom sales tax rates from FreshBooks may need to be reconfigured as standard rates in QuickBooks.

Add any necessary tax adjustments manually.

Step 10: Perform Final Migration Checks

Conduct a final review before discontinuing FreshBooks usage. Check for the following.

  • Missing transactions or incomplete records.
  • Proper linking of journal entries with invoices and bills.
  • Accuracy of open receivables/payables balances

Begin using QuickBooks for all accounting tasks once the migration is complete. Keep your FreshBooks account active temporarily as a reference point until you are confident everything has been successfully transferred.

Why Choose QuickBooks Over FreshBooks?

QuickBooks offers more robust features and scalability for growing businesses. Unlike FreshBooks, QuickBooks provides advanced reporting, inventory management, payroll integration, and support for larger teams. Below is a table of comparison.

FeatureQuickBooksFreshBooks
Target AudienceSmall to medium-sized businesses, startups, and larger teams requiring advanced toolsFreelancers, contractors, and small businesses with basic accounting needs
Pricing (approx.)$19/month$19/month
Ease of UseModerate learning curve; offers customizable dashboards and global searchIntuitive interface; easy for beginners
ScalabilitySupports up to 25 users in higher-tier plans; suitable for growing businessesLimited scalability
InvoicingCustomizable templates, recurring invoices, and payment trackingProfessional templates with time-tracking integration
Inventory ManagementAdvanced inventory tracking (available in the Plus and Advanced plans)Basic inventory tracking for billable items
ReportingRobust reporting tools with customization optionsLimited reporting capabilities
Payroll IntegrationAvailable as an add-on; supports automated payroll and tax filingAdd-on via Gusto; less comprehensive
Time TrackingAvailable in the Essentials plan and aboveIncluded in all plans
Expense TrackingAutomatic categorization, receipt scanning, and bank reconciliationRequires higher-tier plans for mobile receipt capture
Integration OptionsOver 750 third-party apps; supports industry-specific solutionsLimited to 100+ integrations
Customer Support24/7 live chat support; phone support available on all plansLimited support hours; dedicated phone support only in custom plans
Accountant AccessEasy sharing with accountants; includes audit trailsAccountant access limited in lower-tier plans

QuickBooks is better suited for businesses that require advanced features like inventory management, payroll integration, and robust reporting. It is ideal for scalability and larger teams.

Frequently Asked Questions

Is Moving from FreshBooks to QuickBooks Right for You?

Switching to QuickBooks is ideal for businesses that require advanced features and scalability. QuickBooks is suited for businesses with growing accounting needs, such as inventory tracking, detailed financial reporting, or multi-user functionality. However, FreshBooks is still a good choice if your needs are basic.

What should you do Before Migrating from FreshBooks to QuickBooks?

The most important thing to do before migrating from FreshBooks to QuickBooks is to clean up your FreshBooks data and prepare for the migration. Reconcile accounts, resolve pending transactions, and export necessary data as CSV files.

Ensure your QuickBooks subscription is active, and plan the migration during a low-activity period to minimize disruptions.

What should you do After Migrating from FreshBooks to QuickBooks?

After migrating from FreshBooks to QuickBooks, verify data accuracy and customize your QuickBooks settings. Run reports in QuickBooks to confirm that all data has been transferred correctly.

Train your team to use QuickBooks and update workflows as needed. Retain access to your FreshBooks account for reference.

What are the System Requirements for Migrating to QuickBooks?

The system requirements for migrating to QuickBooks are a reliable internet connection, a modern web browser, and a compatible operating system. Supported browsers include Google Chrome, Firefox, and Microsoft Edge.

Ensure your device runs on Windows 10/11 (64-bit) or macOS 10.14 or later, with at least 4 GB of RAM (8 GB recommended) and sufficient storage for temporary files.

What File Format should you Use when Transferring from FreshBooks to QuickBooks?

Use CSV files to transfer data from FreshBooks to QuickBooks. FreshBooks exports data in CSV or Excel, which is then imported into QuickBooks. Ensure the CSV files are formatted correctly and appropriately mapped during import.

Is it Complicated to Convert from FreshBooks to QuickBooks?

Converting from FreshBooks to QuickBooks is straightforward but requires preparation. While the process is simple for most datasets, complexities may arise with large data volumes or unsupported features.

What Data Can be Transferred from FreshBooks to QuickBooks?

Transferable data from FreshBooks to QuickBooks includes customers, vendors, invoices, payments, and expenses. Most financial transactions, balances, and essential lists are migrated seamlessly. However, some customizations or FreshBooks-specific features may require manual re-entry.

What Data Can’t be Transferred from FreshBooks to QuickBooks?

Data that cannot be transferred from FreshBooks to QuickBooks includes attachments, recurring transactions, and certain FreshBooks-specific features. Custom invoice templates and audit trails may also need to be recreated manually in QuickBooks. Verify what data is supported before starting the migration.

What is the Estimated TAT for FreshBooks to QuickBooks Migration?

The estimated TAT (Turnaround Time) for migrating from FreshBooks to QuickBooks is usually 72 hours. This timeframe includes the process of exporting data from FreshBooks, preparing it for import, and successfully uploading it into QuickBooks. However, the exact duration may vary depending on factors such as the volume of data, the complexity of your records (e.g., number of clients, invoices, and expenses), and whether you use third-party tools for automation. For larger datasets or manual migrations, it may take slightly longer.

Hire Expert FreshBooks to QuickBooks Migration Specialists Today

Make your transition seamless with the help of experienced specialists from Dancing Numbers. Our team is equipped to handle every step of your migration—from data import and export to cleanup and validation—with precision and care. Whether you’re moving to QuickBooks, managing complex transactions, or ensuring data accuracy, experts at Dancing Numbers work to minimize downtime, reduce errors, and deliver a smooth, secure migration experience. Get in touch with us for data migration by
+1-800-596-0806 or chat with experts.

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